BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039F12LP1|AL430742
(997 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig871 1871 0.0
>3x_Contig871
Length = 4172
Score = 1871 bits (937), Expect = 0.0
Identities = 976/991 (98%), Gaps = 4/991 (0%)
Strand = Plus / Minus
Query: 9 agatctattacagcatctggntagcaacacatgataagtccttactacgacttttagctt 68
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3609 agatctattacagcatctgg-tagcaacacatgataagtccttactacgacttttagctt 3551
Query: 69 atgtctgttccgagcaagatgttaacaaggccgtttcaatcgtcaacgaactgaagcaag 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3550 atgtctgttccgagcaagatgttaacaaggccgtttcaatcgtcaacgaactgaagcaag 3491
Query: 129 ataaggccctatctgctgcaagaaaaattgcagaaagagctgaamtacttccactagtaa 188
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3490 ataaggccctatctgctgcaagaaaaattgcagaaagagctgaactacttccactagtaa 3431
Query: 189 gaaaaatcaacacgattattgaggccaaatttgaggccgatttcaataatatatgataat 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3430 gaaaaatcaacacgattattgaggccaaatttgaggccgatttcaataatatatgataat 3371
Query: 249 bccctgttcttcttatctggactagaataagtattgtsagtttaaataataattgatttt 308
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3370 cccctgttcttcttatctggactagaataagtattgtcagtttaaataataattgatttt 3311
Query: 309 ccgatccgtgcattgacgttcattttctgccgtaatgtaaattaaactaagtaattctag 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3310 ccgatccgtgcattgacgttcattttctgccgtaatgtaaattaaactaagtaattctag 3251
Query: 369 caataccaatgaaatcaggcatataggtcgttgaatcagagtaaagtcttccaaactatt 428
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3250 caataccaatgaaatcaggcatataggtcgttgaatc-gagtaaagtcttccaaactatt 3192
Query: 429 atttaattctgttgcaagttcatgcattcttcaatttttgtcacttttcaagtggtgtcg 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3191 atttaattctgttgcaagttcatgcattcttcaatttttgtcacttttcaagtggtgtcg 3132
Query: 489 tttcttttacaaattggcgatactgaaaaaaaaattgtacatctgaaccaacatmattga 548
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3131 tttcttttacaaattggcgatactgaaaaaaaaattgtacatctgaaccaacatcattga 3072
Query: 549 aamaggcgatgagctgmaactaaaccagacgagacagcaaccagagggccaccaagtaca 608
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3071 aacaggcgatgagctgcaactaaaccagacgagacagcaaccagagggccaccaagtaca 3012
Query: 609 ccatggmtagatctagtacaagcaatgtctcaaaaaaacgtaatagggattctgtcgaag 668
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3011 ccatggctagatctagtacaagcaatgtctcaaaaaaacgtaatagggattctgtcgaag 2952
Query: 669 aggtagawgaggaaatcacggatatttcttctgatgaaggtgatgtccaagatgaatcma 728
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2951 aggtagatgaggaaatcacggatatttcttctgatgaaggtgatgtccaagatgaatcca 2892
Query: 729 awgatggcgatgaggtagcagaatacttggaatctgaagacgagtttgaaggcgaaaacc 788
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2891 atgatggcgatgaggtagcagaatacttggaatctgaagacgagtttgaaggcgaaaacc 2832
Query: 789 ctgctgataagagaagaagattggctaaacaatatttagagaatttaaaggctgaagctg 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2831 ctgctgataagagaagaagattggctaaacaatatttagagaatttaaaggctgaagctg 2772
Query: 849 aagatattggcgattctctggcgaccgcaagcactgaacaggaccgtcaaacacaattag 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2771 aagatattggcgattctctggcgaccgcaagcactgaacaggaccgtcaaacacaattag 2712
Query: 909 aggattacaataactttgatgctcgtgacttggacagagatatcattgcttccagattga 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2711 aggattacaataactttgatgctcgtgacttggacagagatatcattgcttccagattga 2652
Query: 969 aa-magatgttgcagagc-acaagggcgtat 997
|| |||||||||||||| ||||||||||||
Sbjct: 2651 aacaagatgttgcagagcaacaagggcgtat 2621
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7985
Number of Sequences: 1807
Number of extensions: 7985
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 997
length of database: 10,358,551
effective HSP length: 16
effective length of query: 981
effective length of database: 10,329,639
effective search space: 10133375859
effective search space used: 10133375859
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.3 bits)